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I am trying to get rid of the default "boxedsections" with shadows used in the sciposter class and replace them with either "plainboxedsections" or "plainsections".

In the manual three heading options are mentioned, but not how to switch between them.

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up vote 3 down vote accepted

The documentation indicates that these are class options. So I suggest you try

\documentclass[plainsections]{sciposter}

or

\documentclass[plainboxedsections]{sciposter}
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Thank you! That works perfectly. – Tormod Aug 6 '10 at 11:17

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