Problems converting matlab figures to pdf using /psfragfig

I am trying to include MATLAB figures as pdf files in my thesis. However after reinstalling my OS this doesn't work anymore and I am desperately trying to find a solution...

What I do: I use the function matlabfrag.m to export the .fig files to .eps and .tex files. This works perfectly fine. Then I create a temporary .tex file. This file contains the command

\psfragfig{figurename}


which replaces the standart MATLAB font with latex commands formulas etc. specified in the figurename.tex file. This temporary .tex file is then used to create a .pdf file with the command

pdflatex -shell-escape --src -interaction=nonstopmode tempfilename.tex


So far so good. Before I reinstalled my OS everything worked fine. Now I get the Error:

Package pstool Warning: Execution failed during process: ps2pdf -dAutoFilterColorImages=false -dAutoFilterGrayImages=false -dColorImag eFilter=/FlateEncode -dGrayImageFilter=/FlateEncode -dPDFSETTINGS=/prepress "70 00_CFC60_acc_single-pstool.ps" "7000_CFC60_acc_single-pstool.pdf" This warning occurred on input line 16.

LaTeX Font Info: Try loading font information for T1+aett on input line 16. (/usr/share/texlive/texmf-dist/tex/latex/ae/t1aett.fd File: t1aett.fd 1997/11/16 Font definitions for T1/aett. ) runsystem(echo " === pstool: end processing === ")...executed.

runsystem(rm -- 7000_CFC60_acc_single2.oldaux)...executed.

[1 Non-PDF special ignored!{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] (./7000_CFC60_acc_single2.aux)

LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

) (\end occurred when \ifx on line 16 was incomplete)

The .ps file looks perfectly alright. As the error suggests the problem must be .ps >> .pdf. I also stripped down the .tex file to a bare minimum, however only encountered other errors. Here is my temporary tempfilename.tex file:

\documentclass[11pt, oneside]{article}
\usepackage{graphicx}
\usepackage{amsmath}
\usepackage[T1]{fontenc}
\usepackage[utf8x]{inputenc}
\usepackage{ae}
\usepackage{psfrag}
\usepackage{color}
\usepackage[crop=pdfcrop]{pstool}
\pagestyle{empty}

\begin{document}
\begin{figure}
\centering
\psfragfig[width=\textwidth]{7000_CFC60_acc_single}
\end{figure}

\end{document}


I hope someone can help me :)

-
Do you know that you can export your Matlab figures to pdf directly? –  Jubobs Jan 12 '14 at 17:20
Yes, I know. However in that case I do not have the latex font, only the standart matlab font for legends, axis-name, units etc. –  alukar Jan 12 '14 at 17:31
You can also try matlab2tikz and/or matfig2pgf. There is also plot2svg which converts in to svg and then use inkscape to get tikz code. This is more reliable. Read: matlab figures with latex fonts –  Harish Kumar Jan 13 '14 at 0:16