I am running on windows, and I would like to know what command line options are used internally by pdflatex to convert an eps to pdf file? (Note: to run pdflatex, I downloaded MikTex, and used that as the front end.)
Once MikTex had run, it downloaded the "epstopdf" package (?), along with the command line tools. I then chained the two command line utilities eps2eps, and then epstopdf to generate the file.
i.e., eps2eps file1.eps file2.eps epstopdf file2.eps
(I needed to run eps2eps to fix the lack of a bounding box.)
The contents were correct, but the pdf page size was cropped to the figure size.
When pdflatex generates the files, the intermediate file (xx-converted-to.pdf) the pdf page size was a normal page size (8x11 or whatever).
And to make sure this is clear - this is a question about the epstopdf executable, not how to use pdflatex. My hope is that someone here would have the expertise to explain how pdflatex uses the other executables to generate the intermediate pdf.