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My sections and subsections appear in the bookmarks, but the title does not. I've seen papers including their titles as bookmarks in the PDF.

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You can add a bookmark manually using \bookmark{<title>}:

enter image description here

\documentclass{article}
\usepackage{bookmark}% http://ctan.org/pkg/bookmark
\title{My title}
\author{Me}
\begin{document}
\makeatletter
\bookmark[named=FirstPage]{\@title}
\makeatother
\maketitle
\section{A section}
\subsection{A subsection}
\subsection{Another subsection}
\section{Another section}
\subsection{A subsection}
\subsection{Another subsection}
\end{document}

I've used

\makeatletter
\bookmark[named=FirstPage]{\@title}
\makeatother

in order to use the given \title. However, you could respecify the title and drop the \makeatletter...\makeatother pair.

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