The following code produces headings on the section level starting with the number of the section before the bibliography:
\documentclass{scrbook}
\usepackage{csquotes}
\usepackage[english]{babel}
\usepackage[style=authoryear]{biblatex}
\bibliography{biblatex-examples}
\begin{document}
\nocite{westfahl:space}\nocite{aksin}\nocite{angenendt}
\nocite{baez/article}\nocite{bertram}\nocite{doody}
\nocite{matuz:doody}\nocite{gillies}\nocite{glashow}
\nocite{herrmann}\nocite{kastenholz}\nocite{reese}
\nocite{sarfraz}\nocite{kant:ku}\nocite{nietzsche:historie}
\nocite{brandt}\nocite{hyman}\nocite{pines}\nocite{moraux}
\nocite{salam}\nocite{cms}\nocite{baez/online}\nocite{ctan}
\nocite{itzhaki}\nocite{markey}\nocite{wassenberg}
\nocite{almendro}\nocite{kowalik}\nocite{laufenberg}
\nocite{sorace}\nocite{jcg}\nocite{chiu}\nocite{padhye}
\nocite{geer}\nocite{loh}
\printbibheading
\printbibliography[notkeyword=secondary,heading=subbibliography,title={Primary Sources}]
\printbibliography[keyword=secondary,heading=subbibliography,title={Secondary Sources}]
\end{document}
The resulting section header is 
on the top of page 3 while the header representing the chapter on the top of page 2 is correctly set to "Bibliography". The 0.0 seems wrong. How can I remove it? I tried several combinations with \defbibheading{subbibliography} but I did not succeed.
(with biblatex 2.2, biber 1.2)

bibliography=totocnumberedto get a numbered chapterbibliographyin your TOC. Perhaps something missing in your MWE? – Kurt Oct 8 '12 at 20:37