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As an alternative you could drop using tikzscale and instead set the width of all the subplots to 0.5\linewidth, by adding every axis/.style={width=0.5\linewidth} to the tikzpicture options. Then use \input{fig.tikz} instead of \includegraphics. (By the way, \matrix is a TikZ thing, and is not specific for pgfplots.) \documentclass{article} ...


Following the answer given by @LaRiFaRi, groupplots works for me (code at ShareLatex): \documentclass{standalone} \usepackage{pgfplots} \usetikzlibrary{pgfplots.groupplots} \pgfplotsset{compat=1.3} \begin{document} \begin{tikzpicture} \pgfplotsset{footnotesize,samples=10} \begin{groupplot}[group style = {group size = 3 by 1, horizontal sep = ...

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