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The command to scale an image is \includegraphics[scale=0.5]{burnsideTri.png} (not 0.5cm). If you want to give a certain width, it would be width=0.5cm. You should load graphicx instead of graphics as the prior is much more modern (and I never used the latter, so maybe the scaling will not work, I dunno). Just in order to show you, what an MWE is. ...

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The package import is what you are searching for. If I understand correctly, you want also compile chapter without the main file, so this can combined with the package docmute or standalone: main.tex (in a root directory as /home/jon/thesis) \documentclass{book} \usepackage{graphicx} \usepackage{docmute} \usepackage{import} \title{A book} ...

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Have a look at the combine class. The following example creates two separate files, import1.texand import2.tex. Starting with \pagestyle{combine} the actual file begins. It combines the two separate files by importing them. This way you can compile each document separately but also together. \documentclass{combine} \begin{filecontents}{import1.tex} ...

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The following exmaple shows, that biblatex in conjunction with biber has no limitations in that matter and can handle included files as well. The important thing to remember is: Run biber not bibtex on the basename.bcf which contains the information on what to cite of all included files. \documentclass{report} \usepackage{blindtext} \usepackage{biblatex} ...

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