Starting a paragraph with a display is a sure source for bad output, particularly in connection with wrapfigure
.
I guess your aim is to start the picture insertion down the paragraph; this can only be done with some manual work (in the final revision stage, of course).
One can add \nopar
(defined in the code below) at the end of a suitable line, visually determined in a previous LaTeX run, insert the wrapfigure
code and resume the paragraph.
Recall that every display is assumed to be three lines long, as far as the first optional argument to wrapfigure
is concerned.
\documentclass{article}
\usepackage{tikz,amsmath,wrapfig,lipsum}
\setlength{\intextsep}{0pt}
\newcommand{\nopar}{{\parfillskip=0pt \par}}
\begin{document}
Nunc sed pede. Praesent vitae lectus. Praesent neque justo, vehicula eget, interdum id, facilisis et,
nibh. Phasellus at purus et libero lacinia dictum. Fusce aliquet. Nulla eu ante placerat leo semper
dictum. Mauris metus. Curabitur\nopar
\begin{wrapfigure}[11]{r}{4.5cm}
\begin{tikzpicture}
\fill (-1.1,-1.1) rectangle (3.3, 3.3);
\end{tikzpicture}
\end{wrapfigure}
\noindent
lobortis. Curabitur sollicitudin hendrerit nunc. Donec ultrices lacus id ipsum.
\[
\mathbf{u} = (u_1,0,0)=(u,0,0)=u\mathbf{i}
\]
Nunc sed pede. Praesent vitae lectus. Praesent neque justo, vehicula.
\[
\nabla\cdot\mathbf{u} = 0 \implies
\frac{\partial u}{\partial x}
+ \frac{\partial 0}{\partial y}
+ \frac{\partial 0}{\partial z} = 0
\]
\lipsum[1]
\end{document}

\
before the first equation seems to solve this problem.