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All my typsetting runs are done with pdflatex with the option -aux-directory=auxfiles. Now when TeXWorks detects a corrupt aux file it shows a remove-aux-files-dialog. However, it looks for the aux files in the directory of the tex file and I thus get an error message saying "No auxiliary files associated with this document at the moment."

I read here that there's a script called logParser.js that is responsible for removing the aux files with one click. The code is shown in the linked answer.

How can I change that code so that the aux file are sought for in ./auxfiles?

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