I have a problem with a package that I am not aware I am using ... Here is my main.tex
\RequirePackage{silence}
\WarningFilter{remreset}{The remreset package} %s shut up about obsolete package
% book example for classicthesis.sty
\documentclass[
% Replace twoside with oneside if you are printing your thesis on a single side
% of the paper, or for viewing on screen.
oneside,
%twoside,
11pt, a4paper,
footinclude=true,
headinclude=true,
cleardoublepage=empty
]{scrbook}
\usepackage{lipsum}
\usepackage[linedheaders,parts,pdfspacing]{classicthesis}
\usepackage{amsmath}
\usepackage{amsthm}
\usepackage{acronym}
\usepackage{listings} % ajouté pour corriger les deux erreurs de compilation
\usepackage{graphicx}
\usepackage{tabularx}
\usepackage[dvipsnames]{xcolor}
\usepackage{pdfpages}
\usepackage{hyperref}
\usepackage{microtype}
\hypersetup{
colorlinks=true,
linkcolor=blue,
filecolor=magenta,
urlcolor=NavyBlue,
citecolor=NavyBlue,
}
\usepackage[english]{babel}
\usepackage[largesc]{newpxtext}
\useosf
\linespread{1.05}
\usepackage[utf8]{inputenc}
%\usepackage{wrapfig}
\usepackage{rotating}
\usepackage{epigraph}
\tolerance=1
\emergencystretch=\maxdimen
\hyphenpenalty=10000
\hbadness=10000
\usepackage[font=small,skip=0pt]{caption}
\usepackage{listings}
\lstset{
basicstyle=\ttfamily,
columns=fullflexible,
frame=single,
breaklines=true,
postbreak=\mbox{\textcolor{red}{$\hookrightarrow$}\space},
}
\usepackage{soul} %to allow highlighting text that requires attention
\newcommand{\hash}[1]{{\ttfamily\seqsplit{#1}}}
\begin{document}
\input{titlepage.tex}
\input{first.tex}
%\include{FrontBackMatter/abstract}
%\include{FrontBackMatter/dedication}
%\include{FrontBackMatter/acknowledgements}
%\include{FrontBackMatter/declaration}
\include{FrontBackMatter/contents}
\chapter{Introduction}
\input{chapter1.tex}
\chapter{Genome assembly}
\input{chapter2.tex}
\chapter{Mutation accumulation}
\input{chapter3.tex}
\chapter{Perspectives}
\input{chapter4.tex}
\chapter{Bibliography}
\bibliographystyle{naturemag}
\bibliography{bibliography}
\chapter{annexes - publications}
\input{annexes.tex}
\end{document}
The compilation returns
Package titlesec Warning: Non standard sectioning command \section detected. Using default spacing and no format.
What is that titlesec package? I am not loading it. I am just using \section and \subsection throughout the document.
Any idea?
Thanks a lot, that would be hugely appreciated.
EDIT: here is the miminal example
Package titlesec Warning: Non standard sectioning command \section detected. Using default spacing and no format.
Is this actually a harmless warning? Or does it run the risk to cause other problems?
\RequirePackage{silence}
\WarningFilter{remreset}{The remreset package}
\documentclass[
% Replace twoside with oneside if you are printing your thesis on a single side
% of the paper, or for viewing on screen.
oneside,
%twoside,
11pt, a4paper,
footinclude=true,
headinclude=true,
cleardoublepage=empty
]{scrbook}
\usepackage{lipsum}
\usepackage[linedheaders,parts,pdfspacing]{classicthesis}
\usepackage{amsmath}
\usepackage{amsthm}
\usepackage{acronym}
\usepackage{listings}
\usepackage{graphicx}
\usepackage{tabularx}
\usepackage[dvipsnames]{xcolor}
\usepackage{pdfpages}
\usepackage{hyperref}
\usepackage{microtype}
\hypersetup{
colorlinks=true,
linkcolor=blue,
filecolor=magenta,
urlcolor=NavyBlue,
citecolor=NavyBlue,
}
\usepackage[english]{babel}
\usepackage[largesc]{newpxtext}
\useosf
\linespread{1.05}
\usepackage[utf8]{inputenc}
%\usepackage{wrapfig}
\usepackage{rotating}
\usepackage{epigraph}
\tolerance=1
\emergencystretch=\maxdimen
\hyphenpenalty=10000
\hbadness=10000
\usepackage[font=small,skip=0pt]{caption}
\usepackage{listings}
\lstset{
basicstyle=\ttfamily,
columns=fullflexible,
frame=single,
breaklines=true,
postbreak=\mbox{\textcolor{red}{$\hookrightarrow$}\space},
}
\usepackage{soul} %to allow highlighting text that requires attention
\newcommand{\hash}[1]{{\ttfamily\seqsplit{#1}}}
\begin{document}
\chapter{Introduction}
\section{youpla boum}
blablabal
\end{document}
titlesec
is loaded byclassicthesis
.KOMA-Script
andtitlesec
are not working well together. Maybe you can find a fix here: tex.stackexchange.com/questions/511049/…classicthesis
has some design flaws, which the author acknowledges in the package documentation (he is planning a e-design). However we cannot help you with your code, since we don't have the files you are including. Please prepare a minimal working example (MWE)