This is a duplicate of this question, I have the same problem but I would insert the option

gnuplot def/.append style={prefix={}},

in preamble without repeating it for each tikzpicture. I already have in preamble

\tikzexternalize[prefix=tikz/, optimize command away=\includepdf]

and I'll like to add bodegraph plots too in the same tikz/ subfolder

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