Questions tagged [chemnum]

A modern and flexible package for the num­ber­ing of chem­i­cal com­pounds, including sub-labels, and the creation of lists of compounds. (i.e. Compounds 1, 2a, 3-5)

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Adding suggestions for arguments to the chemnum-package

I am writing my thesis in chemistry and use the chemnum-package to number my compounds. Because it is gotten quite a few compounds now, I would like to get suggestions from texstudio, which tags for ...
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1answer
21 views

Alphabetic counter in chemnum

I wanted to use the alphabetic counter just for a scheme in my thesis. I get a double letter counter. \documentclass[12 pt,a4 paper,oneside,openright,titlepage]{book} \usepackage{chemnum} \...
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1answer
33 views

Change font of \cmpd+{} in chemnum package

I want to have my numbered compounds in bold throughout my text but I want them to have a different format when used in section headers. I tried using the command \cmpd+[format=\normalfont]{label} but ...
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2answers
37 views

\submaincmpdplain and \subcmpdplain not working correctly when sub-labels initiated with \initcmpd

I have come across something weird with the chemnum package. I am trying to have my compound numbers in the pdf bookmarks. So I am using \texorpdfstring{}{} within my section titles. However, the sub-...
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93 views

Chemnum commands not recognized

I am writing my Master thesis in Latex (Texstudio). I need to draw a lot of molecules and want to number them throughout the whole thesis. For some strange reason, the package chemnum isn't working. ...
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30 views

Undefined control sequence. …\@nameuse{cst@float@make@\cst@float@pkg}} error

Seems to be a problem when loading the chemstyle.sty package, newly downloaded. \begin{document} \begin{figure}[htb] \centering \replacecmpd{arabthio} \includegraphics{./...
2
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1answer
46 views

Bookmarks with Unprocessed Commands from chemnum and chemmacros

In my document, I have sections that contain chemmacros \iupac{} command with shorthands provided by chemmacros | as well as my own shorthand =. For some reason, these shorthands are printed in the ...
2
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1answer
49 views

Custom Suffixes for Sub-compounds in chemnum

I'm using chemnum to keep track of my compounds in my thesis, and there are certain instances where I have a group of compounds that differ by a single substituent. Ideally, I would like to be able to ...
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1answer
72 views

Changing the numbering in Chemnum

How do can you change the numbering in the chemnum package? I would like to start from 100 rather than 1 for chapter 1. Then start from 200 for chapter 2 etc.
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0answers
28 views

Combining mhchem and chemnum with an optional argument? [duplicate]

I am trying to combine two packages in to a new command. The problem I have come across is when trying to add an optional parameter. I want to be able to have 2 parameters with the second parameter ...
3
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1answer
130 views

How to change font size and type of chemnum labels?

I currently find the autolabels from chemnum package to be too big and ugly. I'd like to change their font size and type, how can I do this? Download the .eps for the MWE here. \documentclass[...
3
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1answer
193 views

Cross-referencing and chemnum

I have two separated documents, compiled independently and residing in two completely different folders. I heavily rely on the chemnum package to assign numbers to the many molecules I have in both ...
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130 views

Can't Replace TEMP labels in Chemnum

When using this .eps file exported from chemdraw (Mac OSX) I am unable to compile a scheme in TeXShop where the labels are replaced. EDIT1: Upon adding the use \usepackage{auto-pst-pdf} as well as ...
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1answer
238 views

replacecmpd does not let me choose my own label [duplicate]

I'm trying to make use of the \replacecmpd command of the chemnum package in LaTeX in combination with eps files produced by ChemDraw. While this works great for the automatic numbering of chemicals ...
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0answers
218 views

Using package todonotes and auto-pst-pdf does not work

I need auto-pst-pdf so the package chemnum automatically number the chemicals I use in figueres. But I run into the problem that if I use the package todonotes at the same time my TexShop stops ...
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1answer
468 views

Chemnum with Chemdraw 16.0.1.4 not working

I ran into the problem that in my .eps files generated via ChemDraw 16.0 do not get their tags replaced. I tried using a .eps file from 2 years ago (because back then everything worked fine) and for ...
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1answer
131 views

Chemnum makes the temporary markers TMP disappear but doesn't replace them [duplicate]

This question follows one I posted earlier this week (here). I'm having trouble using chemnum, for replacement of temporary labels (TMP1, TMP2, TMP3) in a scheme made with chemdraw. It indeed affects ...
3
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1answer
758 views

chemnum: compounds numbers don't replace TMP at the right position in .eps file (chemdraw)

I'm really new to LaTeX, and even newer to this website, so forgive me in advance for all the mistakes I may have made. Here's my problem: I'm trying to replace the temporary labels (TMP1,...) in an ....
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0answers
98 views

Controlling length of longtable with chemnum schemes in it [closed]

I have been struggling with this for quite a while and I could not find any solution to it. I would like to draw a longtable with seven columns. The first row shows an overview scheme (eps file). Rows ...
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1answer
117 views

How can I show my label/id when using \cmpd from the chemnum package?

I am using the chemnum package of Clemens Niederberger to label my chemical compounds. Now I have quite a large amount of compounds and sometimes it would be helpful to see the label in the document ...
2
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1answer
326 views

Can chemnum replace TMP-Tags in any eps file, e.g. Origin? If so, how?

I'm using Origin and TeXStudio on Windows 10 to plot several graphs for a Lab report. It would be extremely helpful, if chemnum could replace compounds' TMP-Tags in Origin's exported eps-files (here ...
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1answer
285 views

sublimetext 2, auto-pst-pdf, enable shell escape, chemnum

I'm quite new to Latex (and Sublime Text 2) and currently writing my master thesis with them. I need to draw a lot of molecules and want to number them throughout the whole thesis. No, problem, used ...
1
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1answer
441 views

Chemdraw 16 for Mac OSX not working with psfrag and label replacing/autonumbering

(Formerly: Auto-pst-pdf, LuaLaTeX, and chemnum broken in TexLive 2016) I was testing some chemnum stuff now that I've updated to TexLive (TL) 2016. And Im getting and error where the auto-pst-pdf ...
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1answer
450 views

Chemistry: Experimental page with Chemfig, tikz, chemnum

I'm currently writing my Master Thesis in Organic chemistry. Since this is uncomfortable in word having many graphics and numbering I figured Latex would be best. Yesterday I discovered chemfig and ...
5
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1answer
148 views

How to put compound names in braces globally with chemnum?

My supervisor would like my compounds refrences in the form (1), (2), (3). Using numbers is easy: drop \setchemnum{counter-format=arabic} in the preamble. But I can't figure out brackets. The manual ...
2
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1answer
134 views

Is it possible to explicitly declare compound labels in the package chemnum?

Is there a command in the chemnum package that allows labels for a compound to be explicitly defined (for example, if I explicitly wanted a compound to be called A3 or another string), similar to the ...
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1answer
401 views

ShareLaTeX and auto-pst-pdf

In my code I'm using chemnum to number chemical compounds on ShareLaTeX. Since now I was compiling setting latex as compiler, but, for a list of reasons, I would like to switch to pdflatex. So I added ...
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1answer
3k views

Package pdftex.def Error file-pics.pdf not found

I'm using chemnum. Conversion of EPS to PDF failed after a Windows updat: ! Package pdftex.def Error: File `file-pics.pdf' not found.See the pdftex.def package documentation for explanation.Type H &...
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1answer
143 views

package chemnum incompatible with [T1]{fontenc}?

If I use the fontenc package, I do not see compound numbers in the scheme: \documentclass{report} \usepackage[T1]{fontenc} \usepackage{graphicx} \usepackage[crop=off]{auto-pst-pdf} \usepackage{...
2
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0answers
188 views

Two different counters in chemnum package

Is there any possibility to use two independent counters within the chemnum package? I would like to label (by replacing the tags in my .eps file) substances in reactions and steps in catalytic cycles ...
2
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1answer
655 views

No replacement of temporary labels by chemnum in a ChemDraw eps on Mac

I tried to replace the temporary labels TMP1, TMP2 and TMP3 in an .eps file made with ChemDraw v18 on Mac OSX Mojave using the chemnum package, so to get an automatic numbering of the compounds, but ...
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1answer
1k views

Missing Letters when importing .eps files from Chemdraw

I am using TexShop (Version 3.42) to write Chemistry documents. I draw chemical structures in ChemDraw and import the .eps files. Since I recently bought a new computer imported chemical structures ...
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1answer
100 views

Figure disappears if a new page is added before it

In the experimental section of my Master's thesis in chemistry, I'm using chemnum to numbering chemical coumpounds. The problem is that the figures disappears when adding a \newpage in front; see ...
5
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2answers
563 views

Unable to change font using LuaLaTeX with usage of chemnum package

I can't seem to change the font in LuaLaTeX using chemnum as a package. I would like to use Calibri (not Times New Roman) as the case is now. Here is my code: \documentclass[12pt]{report} \usepackage[...
2
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2answers
299 views

Chemnum putting wrong numbers when compound label is introduced as a variable (stored as commands)

I'm on the process of migrating to the chemnum numbering system due to its advanced features (thank you!). For my purposes I need to input external files with the information (for each compound) ...
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1answer
579 views

Replace tag inbetween parentheses in eps with psfrag/chemnum

Question Is it possible to replace the TMP1 inbetween some parentheses (or other symbols and text) with chemnum? Examples The following shows the input (eps; left), and the output (compiled file; ...
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0answers
157 views

Chemnum sublabels in section-titles not working properly [closed]

Problem I'm encountering the problem, that sublabeling \cmpd+{cmpd:main.sub} does not work properly in section-titles, since the sublables are missing in section-titles and ToC. Its also not ...
4
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1answer
518 views

How to define a new temporary label, with a separate counter, using chemnum?

Is there a way, using chemnum, to create a different type of TMP-label in .eps files which can then be replaced in the text with a separate label/numbering? For example, I have many chemdraws which ...
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1answer
787 views

How to change the size and type of font of \replacecmpd in chemnum 1.0

First of all I am new to asking questions here. Second, I am writing a document where I need to import an .eps file to have my scheme. My document is set to use Times New Roman at 12pt, but I want ...
3
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1answer
218 views

Defining own labels with chemnum 1.0

When using: \documentclass{standalone} \usepackage{graphicx,auto-pst-pdf,chemnum} \begin{document} \cmpd[counter-representation=bar]{foo} \end{document} I get "1" as label output. I would like to ...
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0answers
530 views

Chemnum/PSfrag - Replacement of Characters in eps

Using the chemnum package, I encounter problems with replacing temporary labels in EPS files. I first thought that it is a chemnum problem, but the result is the same using psfrag instead of chemnum. ...
3
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0answers
171 views

Chemnum/PS-Frag with EPS-Files and PNG-Files [duplicate]

In my research report, I would like to include both, EPS files to achieve automatic numbering of my compounds in schemes with chemnum and also PNG files to include 3D structures of my molecules. I ...
4
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1answer
144 views

Weird new line using \cmpd from chemnum in long headingtitles

I have a problem using \cmpd in a heading, that is too long. For some weird reason, the compound number gets put on a new line, even though there is no need. I already have a workaround using ~, but ...
4
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2answers
331 views

Chemnum: Chapter-related numbering?

First of all, I just started with LaTeX. So far, I got everything working, including chemnum. However, I want to split my thesis into chapters. Numbering of the compounds is supposed to be 1.1, 1.2, ...
2
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0answers
384 views

Chemstyle creates export error [closed]

So I finally got everything working after having to add several packages I never thought I'd have to. Live preview shows a perfect manuscript, but for some reason, when I go to export, I get this ...
6
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1answer
600 views

Two sets of labels in chemnum

Is it possible to have two sets of labels for numbering compounds throughout the document? Currently I'm using chemnum to make labels like 1, 2, 3a and so on. I want to introduce a new sequence of ...
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0answers
128 views

Need chemnum style, but have the old TeXLive2009 version [closed]

First of all, I am a total beginner with both LaTeX and Ubuntu (and I have no clue about programming etc.), so please explain things in a way that I can follow and thanks in advance for your help and ...
1
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1answer
675 views

Chemnum does not work since last l3package udpate

I am using chemnum package and since last updates of l3packages, l3kernel and l3experimental when I compile my code there are 14 errors. The first one is: LaTeX error: "kernel/command-not-defined" ...
2
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1answer
626 views

How to change fontsize of \cmpdref

I was using chemstyle package, but for some utilities I moved to chemnum. With chemstyle I used \renewcommand*{\schemerefformat}{\fontsize{8pt}{8pt}\textbf{}} in order to reduce the font size of ...
4
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1answer
1k views

chemnum package

The following minimal code using the chemnum package was designed to replace TMP1, TMP2 and TMP3 in an eps file made by ChemDraw by numbers: \documentclass{article} \usepackage{graphicx} \usepackage[...