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Questions tagged [r]

R is an open source programming language and software environment for statistical computing and graphics. It is an implementation of the S programming language combined with lexical scoping semantics inspired by Scheme.

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302 views

tikzDevice in R, set absolutlely all fonts, fontsizes and fontweights to TeX document fontsize

I am learning R, and I want to use tikz to inlcude R plots in my documents. However, to me, half the point is that I want to set absolutely all typefaces, fontsizes, fontweights to the TeX-document ...
4
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0answers
698 views

TeX-function for writing R-functions

I'm working on an introductory course for the R-language in Latex, so I'm trying to write a Latex function that displays the R-function. This is what I've got: \makeatletter \newcommand{\fun}[3]{ ...
3
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0answers
112 views

Including an Rmd file in a Rnw file using pandoc

I was trying to follow this example that shows how to write a separate chapter in RMarkdown and then include it in your main RNW file using \include{}. However, I have not been able to get pandoc to ...
3
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0answers
234 views

Conditional output of LaTeX based on R parameter

I have a report I am working on using knitr which loops through results for a number of identical surveys and produces the same set of tables and figures for each. Some surveys have no data for some ...
3
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0answers
647 views

Produce multiple documents using a loop in LaTex

I want to produce multiple documents in LaTeX. There is a list of values for every document that should be created, in the example it´s \mylist. My first approach was to use the \foreach function to ...
3
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0answers
223 views

tikz stops drawing into pdf after 20 line segments in plot generated through knitr tikzDevice

Problem If I try to draw a curve generated through knitr using tikzDevice into .pdf only 20 line segments of that curve are drawn and TeXstudio, through which I do it, just leaves message running ...
3
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0answers
1k views

Best practice for ggplot transparency in pdf figures

I lost a couple of hours because of few transparent figures which Adobe Professional couldn't flatten to print (it crashed in the process). I wonder if there's any trick to produce PDF figures with ...
2
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0answers
201 views

R and LaTeX: Why does white-space character disappear from path?

I'm creating a manual for an R package using LaTeX, and I have to follow a specific latex style . So, I want to create PDF using well known pdflatex, starting form .tex file generated by 'knitr'. ...
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0answers
238 views

Passing a variable from TeX to R in knitr

I want to use a variable that I define in TeX using \newcommand{} in the R code. Suppose I define following variables: \newcommand{\CourseCode}{MTH 123} \newcommand{\CourseSemester}{Fall} \...
2
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0answers
126 views

glossaries with tikzDevice

I am using tikzDevice to run my R-scripts within latex. This is my code -- \documentclass{article} \usepackage[acronym]{glossaries} \usepackage{tikz} \makeglossaries \newacronym{gcd}{GCD}{...
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0answers
134 views

What is the counterpart in LaTeX for the R package ezknitr and its tools for managing paths and directories

Dean Attali has just added an R package called ezknitr to CRAN. It enables those who use knitr and RMarkdown in .Rmd files to handle directories quite flexibly. His blog describes it well: path ...
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0answers
191 views

incorporating R code in latex, commentstyle not working

I have an issue with no all my R comments being colored in my latex file. I am using the listing package. My pre-amble code is \lstset{ % language=R, basicstyle=\footnotesize, ...
2
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0answers
577 views

To get this WordCloud and R working in OSX's Texpad -1.6.0

I am trying to this Hamilton's code about WordCloud, which uses R, working in OSX. I have latest XCode and latest R 3.1.1 (XCode5 support) installed. Texpad 1.4.7-1.6.0 problem I open TexPad with ...
2
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0answers
499 views

Knitr and numbers

I return to a question, which is few months old and then maybe not yet the best practice around. I use the siunitx package in my documents along with knitr to compile my R chunks. As far as I ...
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0answers
16 views

Tikz .tex file for a ggplot image made in R won't render as pdf in my tex document (but no compile error!)

I'll preface by saying that I'm not sure whether this is better off posted in StackOverflow, and I'd be happy to move it over there if that turns out to be the case. tl;dr I followed the ...
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0answers
63 views

Problem with out of KableExtra tables with LATEX in Rstudio: paste0 function

This is my Rsweave reproducible example: \documentclass{article} \DeclareUnicodeCharacter{3B1}{$\alpha$} \DeclareUnicodeCharacter{3C4}{$\tau$} \DeclareUnicodeCharacter{3C3}{$\sigma$} \...
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0answers
2k views

R Markdown and Latex: Change font family and size for table of contents

I am trying to create an automated report in rmarkdown for business partners and I am a bit stuck on how to alter the table of contents. Essentially, I would like the table of contents to have a ...
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0answers
75 views

passing string from R to href in rnw file

I would like to pass a string from R script in order to run href in my rnw file. In the R script I have to include double \\ for the href otherwise I get error. ifelse(is.na(url_ui_1)|is.null(...
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0answers
148 views

R Sweave: print very large dataframe sample which spans on multiple pages inside a floating environment

I'm using R Sweave to output an R document into a LaTeX file through R Studio on a Windows 7. I have a very large data frame from which I have to put a sample at the begin of my document. I use xtable ...
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0answers
1k views

Specify multiple notes of a table by xtable

I want to create a table which may contain multiple notes like : which I found here. This works fine in a pure LaTeX context, yet I'm using knitr to convert my Rnw files (under R) to pdf, because ...
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0answers
79 views

Incorporating R code in problem sheets of probsoln

While working with the probsoln package, how can I include R code in problem sheets? My main document is \documentclass{article} \usepackage{probsoln, verbatim} \PSNrandseed{200} \begin{document} \...
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0answers
392 views

what does “Error running C:/Users/user/AppData/Local/Programs/MIKTEX~1.9/miktex/bin/pdflatex.exe (exit code 1)” mean?

I am trying to run this code in Rsweave \documentclass[a4paper,12pt]{report} \usepackage[english]{babel} \usepackage[utf8]{inputenc} \usepackage{fancyhdr} \pagestyle{fancy} \fancyhf{} \rhead{\...
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0answers
531 views

general footnotes in xtable

I am using sweave to create pdf. Using xtable, I am trying to insert a general footnotes under the table (i.e: This symbol means bla bla bla). I've tried a lot of things and everything get me an error ...
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0answers
558 views

Writing R code in TeXstudio

I have one chapter of my document which include R code. Whole document is written in TeXstudio. I need help regarding writing and executing R code using Texstudio. Regards
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0answers
46 views

Graphics prepared with Sweave and text disorder

I am preparing a report using Sweave, it is really beautiful, but the first introductory words of my pdf-file appear after the first R-plot! How to fix it? I would like to add that I've already tried ...
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0answers
3k views

Error 43 while knitting a markdown to pdf in a R project created on mac and run on Windows

I created a R project which outputs some plots to pdf using rmarkdown::render with an .Rmd file. I shared the folder when the R project and all the relative files are kept to a colleague using Google ...
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0answers
95 views

Knitr Plot Tooltips for ADA Compliance

I would like to use Knitr to generate plots in R that have hover-over tooltips. Here is a working example without an R tooltip: \documentclass{article} \usepackage{pdfcomment} \begin{...
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0answers
349 views

Extra Curly Braces when creating Xtable using Knitr, after specifiying size

I'm creating a R Markdown document using knitr and am running into trouble using xtable to create a table. My table is very large and I'm trying to reduce the size using the size command in the print ...
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0answers
587 views

ShareLatex knitr install package

Sharelatex comes with a few R library's that you can query. However, it is impossible for me to install a package or query a non pre-installed package. The package I am trying to use is the arm ...
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0answers
464 views

Changing lisoffigures color in Rmarkdown

I'm using Rmarkdown with Rstudio to create PDF, and I add the option \listoffigures, but the font color of the links are pink. I tried to add some TeX option to change it like \listoffigures{"...
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0answers
578 views

Compiling .Rnw file into PDF in RStudio (Error: No file or directory)

I have a .Rnw file. I usually can "Compile" it into a PDF file in RStudio. However, I recently upgraded my R Version to 3.2.0. Now, when I try to "Compile" my .Rnw file I get an error: /Library/...
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0answers
55 views

Including graph using tikz causes not including bibliography file

I am experiencing problems using package tikz. I have produced a graph in R and want to include it in my tex file using package tikz. After I include the the tex file with graph in myfile.tex with ...
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0answers
630 views

Problem using tikzDevice in knitr

I can't seem to get knitr to work with tikzdevice. A simple example: \documentclass{article} \begin{document} <<test, dev='tikz'>>= library(knitr) library(tikzDevice) library(ggplot2) ...
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0answers
522 views

knitr: Several figures with subcaptions, alignment issues

Here is a minimal working example: \documentclass{article} \usepackage{subfig} \begin{document} <<echo=FALSE,out.width="0.49\\linewidth",fig.show="hold",fig.align="center",fig.cap="Some ...
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0answers
28 views

Latex with rmarkdown (RStudio)

What must I do? This is pdfTeX, Version 3.14159265-2.6-1.40.19 (MiKTeX 2.9.6930 64-bit) entering extended mode Sorry, but C:\Users\Silvano\AppData\Local\Programs\MIKTEX~1.9\miktex\bin\x64\pdflatex....
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0answers
16 views

Indexing terms being used in cross-referencing

This is a follow-up question of my previous one: Cross-referencing numeric values and text from later section to executive summary of a latex document I have finished making my report and now my boss ...
0
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0answers
41 views

Having problems with LaTeX coding in Rmarkdown (fancyhdr, \headheight)

I'm currently having an issue with latex in Rmarkdown (using fancyhdr package). I am trying to make a data report with a certain template style. This is a screenshot of the pdf at its current stage ...
0
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0answers
45 views

Converting Tab-delimited reference list into a bibtex format (using R?)

I need to export search results from Web of Science (i.e. all the results of a query, 100s of entries) and import them in Mendeley with their abstract. while I usually can export a citation in a .bib ...
0
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0answers
79 views

I get an error every time I try to run my Latex document in Texmaker, using a chunk code from R

I'm following the following guide: https://joshldavis.com/2014/04/12/beginners-tutorial-for-knitr/ I've installed the knitr package and run it in R, and I'm trying to copy and paste the example from ...
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0answers
199 views

Centering the figure caption when switching page orientation

I'm a newcomer to Latex but I've already found it very useful. I have a document that requires me to switch the orientation from portrait to landscape midway through the document so I can properly fit ...
0
votes
0answers
270 views

R code in LaTeX in YAML before_body include

I have a LaTeX section that I put at the top of my knitr generated PDF document. I achieved this by using the YAML options output: pdf_document: includes: before_body: file....
0
votes
0answers
786 views

RStudio - File not found error, but file exists

I just completed installing MiKTeX 2.9 on my work laptop so that I can using it with RStudio v1.0.153. I'm run just the default R Notebook file that you get when you select New >> R Notebook. After I ...
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0answers
43 views

\isdefempty not working for multiple macros

I am still learning tex. The following example allows me to check if a variable exists, and if it does then prints some text in the PDF. This works great. However, when I add in a href, this appears ...
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0answers
572 views

Stargazer generating code for a table which includes all covariate values

Trying to use "stargazer" to produce some basic regression tables. Here is simplified regression code: fit1 = lm(AverageYieldAtStandardMoisture_BushelsPerAcre~TotalChemicalFertilizerNRate_lbsNperAcre ...
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0answers
108 views

Is it possible to nest multiple overset? otherwise how?

I have a ggplot2 plot for which I'd like to align text to some plot related boundaries e.g. between axis ticks. The process that creates the annotation text is automatic and needs to account for word-...
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0answers
325 views

How can I preview the output of a RNW file?

I currently create pdfs in RStudio by calling the knit2pdf function on a RNW file. However, when playing around with the LaTeX formatting in the RNW file, I'm wondering how I can preview my results? ...
0
votes
0answers
62 views

Why is an extra page inserted before the cover page when changing page colors for a single page?

I am using R and the knitr package to produce a LaTeX PDF. As the MWE below demonstrates, an extra, blank page is created before my boxed page, which is to be the cover of a book. If I remove the ...
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0answers
104 views

R tikzdevice relative directories

I asked this on SO, but perhaps it is more relevant here: This is a problem which I face with many many plots. In R, Lets say I create a ggplot2 plot, with a colourbar: R> sample = ggplot(data=...
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0answers
80 views

Tables causing text to be removed from pdf

I am currently working on putting together a technical report for work and I am using Rmarkdown for the first time to create this pdf. I have been able to debug a lot of the issues I have faced, ...
0
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0answers
155 views

With R, knitr and RStudio, how do you compile a .dtx file to get the .sty file needed for a package?

Working through Stefan Kottwitz's LaTeX Cookbook, page 82, I tried to use the package pullquote. I am using R, the knitr library and the RStudio IDE. When I compiled the .Rnw script that has the ...