Questions tagged [r]

R is an open source programming language and software environment for statistical computing and graphics. It is an implementation of the S programming language combined with lexical scoping semantics inspired by Scheme.

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199
votes
27answers
97k views

Workflow for converting LaTeX into Open Office / MS Word Format

I often have to write up reports based on the analysis of some data. I use R to analyse the data and export tables, figures, and text. This is then included into a LaTeX document either using input or ...
24
votes
1answer
13k views

How to build Knitr document from the command line

I would like to compile a knitr document from the command line. With Sweave, the sequence R CMD Sweave my_sweave_file.Rnw latex my_sweave_file.tex latex my_sweave_file.tex dvips my_sweave_file.dvi ...
48
votes
3answers
46k views

How can I use a table generated by R in LaTeX?

I have a LaTeX table generated like this, \begin{table}[ht] \begin{center} \begin{tabular}{rrrrrrr} \hline & 1 & 2 & 3 & 4 & 5 & 6 \\ \hline 1 & 181.21 & 169.01 &...
24
votes
7answers
11k views

knitr and biblatex

I'd like to create a PDF report with knitr with LaTeX-code in RStudio with biblatex for citations. However, the in-text-citations are always undefined and no bibliography is printed. The same ...
18
votes
2answers
6k views

Building TeX file from knitr Rnw as child of larger parent TeX file to use R objects and output

Here's my general problem: I'm writing my dissertation using a LaTeX template (http://www.latextemplates.com/template/masters-doctoral-thesis). The template is a parent file with multiple chapters as ...
18
votes
3answers
20k views

Using fancyhdr to create an image based header and footer

I'm trying to generate a latex report (via Sweave and R) where the header of the document is an image that covers everything (including the top/left/right page margin) and the footer covers everything ...
21
votes
1answer
5k views

Best Practice for nice layout with tikzDevice

R+tikDevice+LaTex+knitr is (as I understand it) the most efficient way to get relly nice looking publications from R, with maximum layout-support from LaTeX. I'm using R+LaTex+knitr now, but would ...
6
votes
2answers
7k views

Wider tables in LaTeX, which is the best solution?

Hi I have a LaTeX table code generated from R like the following \usepackage{rotating} ... \begin{sidewaystable} \begin{center} \small\addtolength{\tabcolsep}{-7pt} \begin{tabular}{|c|c|c|c|...
8
votes
1answer
714 views

proper tool for charts in tex

I have scanned data graphics in a large ms written in TeX (of course). For copyright reasons I need to redraw these. My publisher may (sadly) decide not to use my source directly, so will need access ...
6
votes
2answers
16k views

Forcing roman font in LaTeX

I am using a LaTeX template from my university to typeset my thesis. I am making references to R and I have defined a new command with: \newcommand{\R}{R} in order to get the roman "R". The ...
11
votes
1answer
1k views

How can I delete non-letter keywords (such as '<-')?

I am using the package to try and format my R code, and I don't like some of the things that are being treated as keywords (for the coloring scheme). However, when I specify deletekeywords={*,<-} ...
7
votes
1answer
3k views

Using biblatex with R Markdown

I am trying to compile a PDF Output with an R Markdown file and build my bibliography with the biblatex package and using R Studio. Here are my code/files in index.Rmd --- title: | Hello World! ...
15
votes
4answers
25k views

Latex Error: 'Sweave.sty' not found?

I downloaded the most recent version of Miktex Basic Installer (2.9.5105). After following the Miktex's instructions, I began working through Nicola Satori's Sweave Tutorial. The R portion of ...
8
votes
2answers
4k views

R, Sweave, Hmisc: pretty-print numbers

I'm creating a LaTeX tables based on a matrix in R using the 'latex' function of the Hmisc package. dat = matrix(c(1000, 100, 10000, 10000), 2) latex(dat, file='') This works (as expected) perfectly....
17
votes
3answers
8k views

Howto: Set up knitr (*.Rnw compilation) from in TexStudio

How do I set up TeXstudio to compile xxx.Rnw files? I am using the TeX-Editor TeXstudio 2.7, on Windows 7, and R 3.01 64-bit. I would like to write a xxx.Rnw-file in TeXstudio and then from ...
5
votes
1answer
2k views

Making a LaTeX text R logo. How maintain the proportions?

I tried to mimic the R logo in jpg format from R site only with LaTeX in order to make it scalable with the context without external files. This is the result at tiny, normal and huge size, compared ...
1
vote
1answer
457 views

missing minus sign in R code using latex

I'm using lstlisting to include my R code in my LaTeX, however, the minus sign after < is not appearing in the compiled file. \usepackage{listings} \begin{document} \begin{lstlisting} [language=R]...
97
votes
3answers
154k views

How to include LaTeX package in R Markdown?

I am writing a report with Rmd in RStudio via knitr package. I want to write a indicator variable symbol in the report, like How do you get \mathbb{1} to work (characteristic function of a set)?. ...
15
votes
3answers
17k views

Using LaTeX font in R (Computer Modern)

I am looking for at way to plot graphs in R, using LaTeX fonts. In the documentation for pdfFonts in R, it states that: There are also mappings for "ComputerModern", "ComputerModernItalic" and, ...
5
votes
3answers
6k views

Help with long table from Stargazer

I have a table made in R with Stargazer however, it is too big to fit a page in LyX. I have tried to use \longtable but it doesn't seem to work (might be doing it wrong). Here is the original code \...
9
votes
1answer
24k views

What is the best way to include R code in the Latex paragraph

I am a newbie in Latex. I have two simple questions regarding including R code in Latex. Q1: For a block of R code, I use 'listings' package, as follows. \documentclass[12pt]{report} \usepackage{...
11
votes
2answers
5k views

A program to export latex tables to excel/ods/csv?

I know there are tools to export excel tables to latex, but what about the other way around? I get a lot of latex tables from functions in R (e.g.: texreg) that aren't perfectly customizable via the ...
9
votes
3answers
3k views

Include Sweave input as verbatim

How do I keep Sweave from compiling things in a verbatim environment? For example: \documentclass{article} \begin{document} \begin{verbatim} <<>>= 1+1 @ \end{verbatim} \end{document} ...
21
votes
2answers
22k views

How can I tell LaTeX that an \input file is in a different encoding from inputenc?

I'm currently writing a .tex report with my wife. She's on a Windows machine and I'm running Linux over here; we've decided to encode our report in ISO-8859-1 (i.e., we use \usepackage[latin1]{...
9
votes
2answers
2k views

tikzDevice is not getting sizes right (knitr)

I am using OSX, pdflatex, R (cran), tikz/tikzDevice and knitr to create my documents. My problem is that the font sizes of the produced tikZ-file do not match the LaTeX document font sizes. Result / ...
8
votes
1answer
1k views

Sweave generating invalid LaTeX

I've encountered a problem when I'm using Sweave to convert an .Rnw file into a .tex file. Sweave is replacing three options from hyperref's \hypersetup block with the value NA. This is the section ...
4
votes
2answers
2k views

Fedora manual installation and dependencies

Following answers on this website (like: How to use TeX Live on Fedora 17? and Manually installed TexLive on Fedora 16 ) I installed texlive manually on fedora and it works flawlessly. The problem I ...
3
votes
5answers
4k views

Export plots from R directly to Latex

Is there a way to export plots from R directly to latex, more specifically TexStudio? I think exporting/saving the image from R and then importing it to R looses some of the quality. I saw on the ...
3
votes
1answer
670 views

Problem in StatWeave

I visited http://www.stat.uiowa.edu/~rlenth/StatWeave/ and installed StatWeave according to the instructions. But my problem is that there are no Step by Step instructions given in the manual, and ...
3
votes
1answer
1k views

R listings operator partially in bold

I am using listings to display R code. The matrix multiplication operator shows up partially bold, something like this: "\%\textbf{*\%}". If I separate the * and the %, the second % is not in bold. I ...
3
votes
1answer
279 views

How can I get Rchunks to render inside tcolorbox?

I've created a reprex to show my problem, but I am having this same issue in a custom Rmd template I am crafting. I would like to be able to include stylized code chunks and plot outputs inside of ...
2
votes
1answer
1k views

siunitx error: “invalid-number” from R

I have a document in .Rnw which I use to produce a .texdocument with kntir. I have a problem with the formula \num{\Sexpr{max(degree)}} which in R console produce 12598 but after the running knitr in ...
2
votes
0answers
7k views

Fatal error occurred, no output PDF file produced in php file [closed]

We are using following code in .php script for generate .pdf file. $result1 = exec("R CMD Sweave /var/www/html/r/r_latex_sweave.Rnw"); $result2 = exec("pdflatex /var/www/html/r/r_latex_sweave.tex"); ...
1
vote
1answer
76 views

R studio cannot make xtable

library(xtable) library(magrittr) library(moonBook) options(ztable.type="html") a=mytable(head(iris)) a x = xtable(a) x i cannot make xtable, just use mytable... want to use xtable, but output like ...
0
votes
1answer
42 views

Several error in equation typing

This is my equation. \begin{equation} E$\epsilon$$\epsilon$=V$_$$\epsilon\$=$\Omega$ \end{equation} These are the errors that I'm receiving Dispaly math should end with $$ Missing $ inserted Missing {...
30
votes
4answers
3k views

Literate R Programming

I'd like to embed some R into a LaTeX document. After a bit of googling I found that Sweave and knitr allow you to do this. I compiled a simple example with Sweave and it works. I'd be much obliged ...
28
votes
2answers
33k views

Getting Sweave code chunks to stay inside page margins?

Sometimes I get to make an R code chunk (in Sweave) which is longer then the margins of the page. Is there a way to force it to "go to the next line" once that happens? Here is a simple example of ...
29
votes
4answers
10k views

Error: Font ts1-zi4r at 540 not found

I use MikTeX in order to compile pdf files when creating R packages. Today I found out that I run into the following error: * checking PDF version of manual ... WARNING LaTeX errors when creating PDF ...
10
votes
3answers
60k views

How to include R output in LaTex? [duplicate]

I am not sure about how to include my r output in the best way in my latex document. Currently I saved my R output (NOT R CODE!) into a txt file: *---------------------------------* * GARCH ...
19
votes
2answers
16k views

Tables with multiple panels in LaTeX, R and Sweave

I would like to know what the accepted Sweave/R/LaTeX solution is for producing tables with "panels": multiple parts, which may or may not contain the same columns, combined into one table. The ...
11
votes
2answers
2k views

Encrypt and decrypt parts of text in a LaTeX source file

Assume that you have some text in parts of your LaTeX document that you only want people with a password to see. A reason could e.g. be a case with an guiding answer. You want to make the case public ...
8
votes
1answer
3k views

Barchart with pgfplots with data from R

It took me a while to create a nice (... to some extent) bar chart with R which represents what I need. However I noticed it doesn't look very aesthetic in my Latex document. Sweave isn't a good ...
9
votes
1answer
3k views

Automating Adding Tables Fast to LateX from R? [duplicate]

Possible Duplicate: How can I use a table generated by R in LaTeX? I use a lot of tables from R, and I find it cumbersome and very slow to type the "&" and "\" etc. to get the tables ...
8
votes
2answers
7k views

R-code linebreaks AND code highlighting in knitr

I used the great answer from @Sharpie on 19 Jan 2012 Getting Sweave code chunks to stay inside page margins? to get linebreaks in the R-code, but how can there be code highlighting (colors) too? \...
10
votes
3answers
1k views

New R Logo with Tikz

I want to make the following new R logo with tikz. My MWE with output is: \documentclass{standalone} \usepackage{tikz} \begin{document} \begin{tikzpicture}[] \node[blue] at (0,0) {R}; \draw (0,0)...
10
votes
5answers
4k views

How to get correct dimensions for a ggplot2 plot in beamer

I have a beamer presentation made with Sweave that I'm preparing and was wanting to place some ggplot2 graphs in but the aspect ratio does not seem to come out correct. This is what is in my Rnw file....
10
votes
1answer
272 views

How to incorporate a TEXMF tree managed by distro's package manager when using TeX Live from upstream on a GNU/Linux system?

I am using upstream's TeX Live on a GNU/Linux system with default paths except for the use of symbolic links to facilitate switching between different versions of TL. So, for example, TEXMFMAIN is /...
4
votes
1answer
3k views

Can TinyTeX replace MiKTeX or TeX Live

On Windows I use MiKTeX and TeXstudio. On Linux I use TeX Live and TeXstudio. I don't write much in LaTeX. I write a lot in R Markdown. R Markdown output to pdf works best (for me) with TinyTeX LaTeX ...
3
votes
1answer
3k views

Sweave on Windows 7 - using Texmaker

So I've tried to configue Sweave on Texmaker following these instructions: http://arts.uwaterloo.ca/~tmparker/722/hw/Setup_Sweave_in_Texmaker.pdf When I go to run this example: \documentclass[...
2
votes
0answers
663 views

To get this WordCloud and R working in OSX's Texpad -1.6.0

I am trying to this Hamilton's code about WordCloud, which uses R, working in OSX. I have latest XCode and latest R 3.1.1 (XCode5 support) installed. Texpad 1.4.7-1.6.0 problem I open TexPad with ...